云之南

风声，雨声，读书声，声声入耳；家事，国事，天下事，事事关心

日志

关于我

云之南

专业背景：计算机科学研究方向与兴趣: JavaEE-Web软件开发, 生物信息学, 数据挖掘与机器学习, 智能信息系统目前工作: 基因组, 转录组, NGS高通量数据分析, 生物数据挖掘, 植物系统发育和比较进化基因组学

文章分类

mirRNA

2010-03-31 10:08:22| 分类： noncodingRNA | 标签： |举报 |字号大中小订阅

下载LOFTER 我的照片书 |

miRDeep

http://www.mdc-berlin.de/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/

Novocraft

http://www.novocraft.com/

对应的引用文章，学习他们的分析方法

miRanalyzer

http://web.bioinformatics.cicbiogune.es/microRNA/miRanalyser.php

MicroRazerS: rapid alignment of small RNA reads

http://bioinformatics.oxfordjournals.org/cgi/content/short/26/1/123

评论这张

转发至微博

阅读(981)| 评论(0)

历史上的今天

this.p={  m:2,
              b:2,
              loftPermalink:'',
              id:'fks_080064085087089068085081081095085094087074093087083071',
              blogTitle:'mirRNA',
              blogAbstract:'  <P style=\"TEXT-INDENT: 2em;\"  \>miRDeep</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>http://www.mdc-berlin.de/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>Novocraft </P\>  <P style=\"TEXT-INDENT: 2em;\"  \>http://www.novocraft.com/</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>对应的引用文章，学习他们的分析方法</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>miRanalyzer</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>http://web.bioinformatics.cicbiogune.es/microRNA/miRanalyser.php</P\>  <P style=\"TEXT-INDENT: 2em;\"  \>MicroRazerS: rapid alignment of small RNA reads</P\>',
              blogTag:'',
              blogUrl:'blog/static/18699154201023110822408',
              isPublished:1,
              istop:false,
              type:0,
              modifyTime:1337834414682,
              publishTime:1270001302408,
              permalink:'blog/static/18699154201023110822408',
              commentCount:0,
              mainCommentCount:0,
              recommendCount:0,
              bsrk:-100,
              publisherId:0,
              recomBlogHome:false,
              currentRecomBlog:false,
              attachmentsFileIds:[],
              vote:{},
              groupInfo:{},
              friendstatus:'none',
              followstatus:'unFollow',
              pubSucc:'',
              visitorProvince:'',
              visitorCity:'',
              visitorNewUser:false,
              postAddInfo:{},
              mset:'000',
              mcon:'',
              srk:-100,
              remindgoodnightblog:false,
              isBlackVisitor:false,
              isShowYodaoAd:true,
              hostIntro:'专业背景：计算机科学                           \n\n研究方向与兴趣: JavaEE-Web软件开发,\n生物信息学, 数据挖掘与机器学习, 智能信息系统                                                                \n目前工作: 基因组, 转录组, NGS高通量数据分析, 生物数据挖掘, 植物系统发育和比较进化基因组学',
              hmcon:'1',
              selfRecomBlogCount:'0',
              lofter_single:'<iframe width="140" height="560" style="overflow:hidden;" src="http://www.lofter.com/mailEntry.do?blogad=1&blog" frameBorder="0"></iframe>'
            }

{list a as x}
    {if !!x}
    <div class="iblock nbw-fce nbw-f40">
      <a class="fc03 noul" target="_blank" hidefocus="true" href="http://blog.163.com/${x.visitorName}/">
      {if x.visitorName==visitor.userName}
      <img alt="${x.visitorNickname|escape}" onerror="this.src=location.f40" class="cwd bdwa bdc0" src="${fn1(x.visitorName)}&r=${visitor.imageUpdateTime}"/>
      {else}
      <img alt="${x.visitorNickname|escape}" onerror="this.src=location.f40" class="cwd bdwa bdc0" src="${fn1(x.visitorName)}"/>
      {/if}
      </a>
      <div class="cwd vname thide">
        {if x.moveFrom=='wap'}
          <a class="noul pnt" target="_blank" href="http://blog.163.com/services/wapblog.html?frompersonalbloghome"><span title="来自网易手机博客" class="iblock wapIcon"> </span></a>
        {elseif x.moveFrom=='iphone'}
          <a class="noul pnt" target="_blank"><span title="来自iPhone客户端" class="iblock iphoneIcon"> </span></a>
        {elseif x.moveFrom=='android'}
          <a class="noul pnt" target="_blank"><span title="来自Android客户端" class="iblock androidIcon"> </span></a>
        {elseif x.moveFrom=='mobile'}
          <a class="noul pnt" target="_blank" href="http://blog.163.com/services/emsblog.html?frompersonalbloghome"><span title="来自网易短信写博" class="iblock wapIcon"> </span></a>
        {/if}
        <a class="fc03 m2a"  target="_blank" hidefocus="true" href="http://blog.163.com/${x.visitorName}/">
          ${fn(x.visitorNickname,8)|escape}
        </a>
      </div>
    </div>
    {/if}
    {/list}

<#--最新日志，群博日志--> <#--推荐日志-->

<p class="fc06">推荐过这篇日志的人：</p>
    <div>
      {list a as x}
      {if !!x}
      <div class="iblock nbw-fce nbw-f40">
        <a class="fc03 noul" target="_blank" hidefocus="true" href="http://blog.163.com/${x.recommenderName}/">
        <img alt="${x.recommenderNickname|escape}" onerror="this.src=location.f40" class="cwd bdwa bdc0" src="${fn1(x.recommenderName)}"/>
        </a>
        <div class="cwd thide">
          <a class="fc03 m2a" target="_blank" hidefocus="true" href="http://blog.163.com/${x.recommenderName}/">
            ${fn(x.recommenderNickname,6)|escape}
          </a>
        </div>
      </div>
      {/if}
      {/list}
    </div>
    {if !!b&&b.length>0}
    <p  class="fc06">他们还推荐了：</p>
    <ul>
    {list b as y}
      {if !!y}
        <li class="rrb"><span class="iblock">·</span><a class="fc03 m2a" target="_blank" href="http://blog.163.com/${y.recommendBlogPermalink}/?from=blog/static/18699154201023110822408">${y.recommendBlogTitle|escape}</a></li>
      {/if}
    {/list}
    </ul>
    {/if}

<#--引用记录--> <#--博主推荐--> <#--随机阅读--> <#--首页推荐--> <#--历史上的今天--> <#--被推荐日志--> <#--上一篇，下一篇--> <#-- 热度 -->

{list a as x}
    {if !!x}
    <div class="hotItem iblock nbw-fce nbw-f40">
      <a class="fc03 noul" target="_blank" hidefocus="true" href="http://blog.163.com/${x.publisherUsername}/">
      {if x.publisherUsername==visitor.userName}
      <img alt="${x.publisherNickname|escape}" onerror="this.src=location.f40" class="cwd bdwa bdc0" src="${fn1(x.publisherUsername)}&r=${visitor.imageUpdateTime}"/>
      {else}
      <img alt="${x.publisherNickname|escape}" onerror="this.src=location.f40" class="cwd bdwa bdc0" src="${fn1(x.publisherUsername)}"/>
      {/if}
      </a>
      <div class="cwd vname thide">
        <a class="fc03 m2a"  target="_blank" hidefocus="true" href="http://blog.163.com/${x.publisherUsername}/">
          ${fn(x.publisherNickname,8)|escape}
        </a>
      </div>
      <a class="f-myLikeIcons hottype {if x.type==1} js-liketype{elseif x.type==2} js-reblogtype{elseif x.type==3} js-sharetype{else}{/if}" target="_blank" hidefocus="true" href="http://blog.163.com/${x.publisherUsername}/"> </a>
    </div>
    {/if}
    {/list}

<#-- 网易新闻广告 --> <#--右边模块结构--> <#--评论模块结构--> <#--引用模块结构--> <#--博主发起的投票-->

页脚

我的照片书 - 手机博客 - 下载LOFTER APP - 订阅此博客

云之南

导航

日志

mirRNA

历史上的今天

最近读者

热度

评论

页脚